I grabbed an extra wiring harness long ago thinking ill have a spare. One day out of boredom at work, i took that harness in along with a multimeter just to check it out. To my finding was 2 wires not making continuity. Careful inspection showed zero signs of damage and great terminal connection. Those wires had to be broke within the wire jacket somewhere along within. Probably the reason why the car got parted out....faulty harness and the owner frustrated with trying to repair the car. Racking his brain trying to figure out the problem and just gave up.
Anyhow....take that crap out and double down on connections. Be 100% sure
I've been going through it quite a bit and did catch a few mistakes and semi-loose connections but still have made no difference in how the car is misfiring. I also took a Dow rod and listened to all the injectors and they seem to be clicking along properly.
I stumbled upon an almost perfect photo over on TCCoa forums showing the vacuum harness but there was one or two lines I couldn't see 100% so I tried several configurations without a noticeable difference.
I made a thread over there too asking about the vacuum harness so that might help it out if someone can chime in.
After that I'll have to re-tighten the manifold bolts (even though carb cleaner didn't make it jump in rpm when spraying around). Then I'm out of ideas.