I know that the stock 95 GT strut tower brace and the 95 cobra strut tower brace are shaped differently. Also, I have a 96 cobra hood on my 95 GT and the stock 95 brace rubs the hood a little in the center. Of course, the 96 cobra had the modular motor, so it's a difffernt shape anyway. But, I would say that if the one in the picture there is the stock GT brace, it would not fit the cobra intake.
I have heard that Steeda makes one that fits, and so does Kenny Brown.